STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10017324Endochitinase 1; Belongs to the glycosyl hydrolase 18 family. (383 aa)    
Predicted Functional Partners:
AM587_10000593
Cytochrome c oxidase subunit 5B.
   
 0.564
AM587_10004583
Cytochrome c oxidase subunit 6b-1.
    
  0.551
AM587_10002281
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
  0.541
cox3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
  0.541
AM587_10010230
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
    
 0.446
AM587_10016871
Cytochrome b-c1 complex subunit 7.
   
  0.435
AM587_10009228
Cytochrome c1.
    
  0.433
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.