STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10008580Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (663 aa)    
Predicted Functional Partners:
AM587_10009792
3-ketoacyl-CoA thiolase A.
  
 0.946
AM587_10008513
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.943
AM587_10000853
Enoyl-CoA delta isomerase 2.
  
 0.941
AM587_10015637
Enoyl-CoA delta isomerase 2.
  
 0.941
AM587_10013072
Hydroxyacyl-coenzyme A dehydrogenase.
  
 0.940
AM587_10003458
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.920
AM587_10015193
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.905
AM587_10006311
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.894
AM587_10008484
Trifunctional enzyme subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.894
AM587_10004848
Ethylmalonyl-CoA decarboxylase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.892
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.