STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10001345Serine/threonine-protein kinase drkB. (656 aa)    
Predicted Functional Partners:
AM587_10016239
Lap4 protein.
    
  0.642
AM587_10015961
3-phosphoinositide-dependent protein kinase 1; Belongs to the protein kinase superfamily.
  
 
  0.629
AM587_10016473
Intersectin-2.
    
  0.621
AM587_10015241
3-phosphoinositide-dependent protein kinase 1.
  
 
  0.613
AM587_10011245
Potassium voltage-gated channel subfamily H member 7.
  
 
0.611
AM587_10002671
CBL-interacting serine/threonine-protein kinase 26.
  
 
  0.611
AM587_10010176
Diacylglycerol O-acyltransferase 2.
  
 
  0.599
AM587_10005206
E3 ubiquitin-protein ligase mind-bomb.
    
  0.598
AM587_10017570
Phosphatidylinositol 3.
    
  0.571
AM587_10011730
Serine/threonine-protein kinase AtPK2/AtPK19.
  
 
  0.570
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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