STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10008244Uncharacterized protein. (730 aa)    
Predicted Functional Partners:
AM587_10013195
Malate synthase; Belongs to the malate synthase family.
   
 
 0.660
AM587_10013617
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.556
AM587_10017460
Autophagy-related protein.
    
  0.542
AM587_10012000
Separin.
    
 0.491
AM587_10012001
Uncharacterized protein.
    
 0.491
AM587_10008243
Uncharacterized protein.
 
      0.472
AM587_10013451
Serine/threonine-protein kinase PLK.
    
 0.437
AM587_10012549
Kinase protein.
    
 0.437
AM587_10010755
Serine/threonine-protein kinase PLK4.
    
 0.437
AM587_10012551
Kinase protein.
    
 0.437
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.