STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10008245WRKY transcription factor 19. (306 aa)    
Predicted Functional Partners:
AM587_10006410
CBM1 domain-containing protein.
    
 0.737
AM587_10007955
Crystallin J1A.
    
 0.737
AM587_10005859
PDZ domain-containing protein.
    
 0.737
AM587_10009319
Septum-promoting GTP-binding protein 1.
    
 0.629
AM587_10003680
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.619
AM587_10004082
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.619
AM587_10007256
Uncharacterized protein.
    
 0.619
AM587_10005333
Uncharacterized protein.
    
 0.619
AM587_10012070
Myb-like domain-containing protein.
    
 0.615
AM587_10005206
E3 ubiquitin-protein ligase mind-bomb.
    
  0.612
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.