STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10008690Agrin. (382 aa)    
Predicted Functional Partners:
AM587_10002044
NAD(P)H-hydrate epimerase.
     
 0.695
AM587_10006731
Potassium voltage-gated channel subfamily H member 7.
    
  0.601
AM587_10007889
Uncharacterized protein.
    
  0.546
AM587_10007888
Potassium voltage-gated channel subfamily KQT member 5.
    
  0.546
AM587_10007674
Uncharacterized protein.
    
 0.518
AM587_10016604
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.513
AM587_10016232
Potassium voltage-gated channel subfamily B member 2.
    
  0.511
AM587_10009780
Potassium voltage-gated channel protein Shaker.
    
  0.511
AM587_10013605
Potassium voltage-gated channel subfamily A member 5.
    
  0.511
AM587_10002863
Potassium voltage-gated channel subfamily A member 4.
    
  0.511
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.