STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10016845Eukaryotic translation elongation factor 1 epsilon-1. (227 aa)    
Predicted Functional Partners:
AM587_10007269
Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
AM587_10004000
Arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
AM587_10015602
Bifunctional glutamate/proline--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.999
AM587_10016603
Arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
AM587_10011014
Isoleucine--tRNA ligase.
  
 0.999
AM587_10017211
Tyrosine--tRNA ligase.
   
0.999
AM587_10008915
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.999
AM587_10016222
Lysine--tRNA ligase.
   
 0.996
AM587_10014311
Lysine--tRNA ligase.
   
 0.996
AM587_10009664
Aspartate--tRNA ligase.
  
 0.996
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.