STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10004664Mitochondrial Carrier (MC) Family. (226 aa)    
Predicted Functional Partners:
AM587_10004907
Sushi.
    
 0.896
AM587_10013396
Fibroblast growth factor receptor 2.
    
  0.768
AM587_10002170
Receptor-type tyrosine-protein phosphatase eta.
    
  0.723
AM587_10001894
Receptor-type tyrosine-protein phosphatase eta.
    
  0.723
AM587_10007103
Receptor-type tyrosine-protein phosphatase delta.
    
 0.722
AM587_10014609
Tyrosine-protein phosphatase non-receptor type 9.
    
  0.721
AM587_10011092
EGF-like domain-containing protein.
    
0.718
AM587_10011435
Uncharacterized protein.
    
 0.718
AM587_10005427
Nudix hydrolase domain-containing protein.
    
 0.711
AM587_10007419
Major Facilitator Superfamily (MFS).
    
 0.711
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.