STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10012291Elongation of very long chain fatty acids protein 2. (367 aa)    
Predicted Functional Partners:
AM587_10014555
Spindle pole body component.
    
 0.669
AM587_10015990
Gamma-tubulin complex component 2.
    
 0.626
AM587_10010208
Propionyl-CoA carboxylase beta chain.
    
 0.615
AM587_10007886
Methylcrotonoyl-CoA carboxylase beta chain.
    
 0.615
AM587_10009801
Spindle pole body component.
    
 0.549
AM587_10013160
GCP_C_terminal domain-containing protein.
    
 0.549
AM587_10013159
Spindle pole body component.
    
 0.549
AM587_10015962
Uncharacterized protein.
    
 0.549
AM587_10015963
Gamma-tubulin complex component 6.
    
 0.549
AM587_10004888
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.519
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.