STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10003952FYVE-type domain-containing protein. (677 aa)    
Predicted Functional Partners:
AM587_10010299
Calcium uptake protein 1.
    
 0.582
AM587_10003747
Calcium uptake protein 3.
    
 0.582
AM587_10004527
Prohibitin.
    
  0.518
AM587_10009142
Transmembrane protein.
    
  0.509
AM587_10005715
Serine/threonine-protein kinase drkD.
    
  0.509
AM587_10012218
SH2 domain-containing protein.
    
  0.509
AM587_10017771
Prohibitin.
    
  0.501
AM587_10017216
Calcium uniporter protein.
     
 0.500
AM587_10006519
Calcium uniporter protein.
     
 0.500
AM587_10013620
Ras-related GTP-binding protein A.
    
 
 0.420
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.