STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10004890Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
AM587_10012993
SWI/SNF complex component SNF12.
    
 0.762
AM587_10008332
Histone H2A deubiquitinase MYSM1.
    
 0.684
AM587_10007642
Actin; Belongs to the actin family.
    
 0.675
AM587_10009402
Actin; Belongs to the actin family.
    
 0.675
AM587_10012641
SWI/SNF-related matrix-associated actin-dependent regulator.
    
 0.643
AM587_10003841
Chromatin structure-remodeling complex protein BSH.
    
 0.643
AM587_10002589
Chromatin structure-remodeling complex protein BSH.
    
 0.643
AM587_10008152
SWI/SNF and RSC complexes subunit ssr2.
    
 0.638
AM587_10000988
SWI/SNF and RSC complexes subunit ssr2.
    
 0.638
AM587_10014331
Upstream activation factor subunit spp27.
    
 0.634
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.