STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10008784Ubiquitin carboxyl-terminal hydrolase. (307 aa)    
Predicted Functional Partners:
AM587_10008332
Histone H2A deubiquitinase MYSM1.
   
 0.982
AM587_10011532
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.960
AM587_10016315
Origin recognition complex subunit 2.
   
 0.911
AM587_10009326
Wee1 protein kinase.
  
 0.902
AM587_10009192
Cyclin B; Belongs to the cyclin family.
   
 0.898
AM587_10016077
Uncharacterized protein.
   
 0.898
AM587_10005536
Uncharacterized protein.
   
 0.898
AM587_10012538
CBL-interacting protein kinase 31.
  
0.894
AM587_10007330
Retinoblastoma-associated protein.
   
 0.884
AM587_10006556
Cell division control protein 6.
   
 0.881
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.