STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10014265Histone acetyltransferase HAC1. (1307 aa)    
Predicted Functional Partners:
AM587_10008332
Histone H2A deubiquitinase MYSM1.
   
 
 0.977
AM587_10012685
Histone-arginine methyltransferase CARMER; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.727
AM587_10015390
Histone acetyltransferase GCN5.
    
 0.715
AM587_10012070
Myb-like domain-containing protein.
    
 0.693
AM587_10008261
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
   
 0.689
AM587_10017372
Histone H3.
    
 0.670
AM587_10017047
Histone H3.
    
 0.670
AM587_10014550
Fork head transcription factor 1.
    
 0.664
AM587_10010317
Uncharacterized protein.
    
 0.664
AM587_10010315
Uncharacterized protein.
    
 0.664
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.