STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_1000674026S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (405 aa)    
Predicted Functional Partners:
AM587_10014409
26S proteasome non-ATPase regulatory subunit 6.
   
 0.998
AM587_10007421
Ubiquitin carboxyl-terminal hydrolase.
   
 0.998
AM587_10014919
26S proteasome non-ATPase regulatory subunit 8 A.
   
 0.998
AM587_10011840
Proteasome subunit alpha type.
  
 0.998
AM587_10009006
Proteasomal ubiquitin receptor ADRM1.
   
 0.998
AM587_10013243
26S proteasome non-ATPase regulatory subunit 7.
   
 0.998
AM587_10006299
26S proteasome non-ATPase regulatory subunit 4.
   
 0.998
AM587_10014042
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
  
 0.998
AM587_10015372
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
  
 0.998
AM587_10003203
26S proteasome non-ATPase regulatory subunit 12.
   
 0.998
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.