STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10005504Uncharacterized protein. (438 aa)    
Predicted Functional Partners:
AM587_10009265
Inactive protein kinase.
   
 0.766
AM587_10013779
Ribosomal RNA small subunit methyltransferase mra1.
   
 0.766
AM587_10010437
Kinase protein.
    
 0.747
AM587_10010752
Calcium/calmodulin-dependent protein kinase type 1D.
    
 0.747
AM587_10003090
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.730
AM587_10010007
Cyclin-dependent kinase 3.
    
 0.730
AM587_10010008
Cyclin-dependent kinase 3; Belongs to the cyclin family.
    
 0.730
AM587_10008784
Ubiquitin carboxyl-terminal hydrolase.
    
 0.730
AM587_10013451
Serine/threonine-protein kinase PLK.
   
 0.693
AM587_10012549
Kinase protein.
   
 0.693
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.