STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10011545Lysosomal beta glucosidase. (774 aa)    
Predicted Functional Partners:
AM587_10017175
20S-pre-rRNA D-site endonuclease nob1.
   
 0.627
AM587_10013237
Testis-expressed sequence 10 protein.
    
 0.605
AM587_10013653
Sucrase-isomaltase.
    
  0.603
AM587_10004907
Sushi.
    
 0.574
AM587_10008864
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.565
AM587_10006092
Glucan 1; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.543
AM587_10006089
Glucan 1.
    
  0.532
AM587_10013278
Polynucleotide 5'-hydroxyl-kinase NOL9.
    
  0.523
AM587_10013577
Ribosomal biogenesis protein LAS1L.
    
  0.513
AM587_10013206
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
  0.508
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.