STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10011618Transportin-1. (75 aa)    
Predicted Functional Partners:
AM587_10011108
Serine/threonine-protein phosphatase.
    
  0.606
AM587_10016239
Lap4 protein.
    
 0.575
AM587_10008868
Nitrate reductase.
    
  0.504
AM587_10015448
Nitrate reductase; Belongs to the cytochrome b5 family.
    
  0.504
AM587_10008132
Kinase 2 protein.
    
  0.501
AM587_10008626
Nuclear receptor 2C2-associated protein.
    
  0.501
AM587_10007645
Elongation factor Tu GTP-binding domain-containing protein 1.
    
  0.501
AM587_10007331
RAC family serine/threonine-protein kinase.
    
  0.501
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
  0.484
AM587_10009447
Mucolipin-1.
     
 0.484
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.