Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM587_10004392 | AM587_10004465 | A0A0W8BW71 | A0A0W8DVP2 | DNA-directed RNA polymerase II subunit J. | Bacterial MDR protein. | 0.999 |
AM587_10004392 | AM587_10004665 | A0A0W8BW71 | A0A0W8D4Q4 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerases I. | 0.999 |
AM587_10004392 | AM587_10008300 | A0A0W8BW71 | A0A0W8DZP7 | DNA-directed RNA polymerase II subunit J. | Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family. | 0.999 |
AM587_10004392 | AM587_10009227 | A0A0W8BW71 | A0A0W8DK05 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.973 |
AM587_10004392 | AM587_10009544 | A0A0W8BW71 | A0A0W8BNE7 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerases II. | 0.999 |
AM587_10004392 | AM587_10010060 | A0A0W8BW71 | A0A0W8DV10 | DNA-directed RNA polymerase II subunit J. | Transcription elongation factor SPT4. | 0.994 |
AM587_10004392 | AM587_10010543 | A0A0W8BW71 | A0A0W8DDL4 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerase II subunit RPB4. | 0.999 |
AM587_10004392 | AM587_10011138 | A0A0W8BW71 | A0A0W8CC10 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerases I. | 0.999 |
AM587_10004392 | AM587_10011895 | A0A0W8BW71 | A0A0W8BWY3 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
AM587_10004392 | AM587_10012170 | A0A0W8BW71 | A0A0W8DY67 | DNA-directed RNA polymerase II subunit J. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.968 |
AM587_10004465 | AM587_10004392 | A0A0W8DVP2 | A0A0W8BW71 | Bacterial MDR protein. | DNA-directed RNA polymerase II subunit J. | 0.999 |
AM587_10004465 | AM587_10004665 | A0A0W8DVP2 | A0A0W8D4Q4 | Bacterial MDR protein. | DNA-directed RNA polymerases I. | 0.999 |
AM587_10004465 | AM587_10008300 | A0A0W8DVP2 | A0A0W8DZP7 | Bacterial MDR protein. | Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family. | 0.999 |
AM587_10004465 | AM587_10009227 | A0A0W8DVP2 | A0A0W8DK05 | Bacterial MDR protein. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.897 |
AM587_10004465 | AM587_10009544 | A0A0W8DVP2 | A0A0W8BNE7 | Bacterial MDR protein. | DNA-directed RNA polymerases II. | 0.999 |
AM587_10004465 | AM587_10010060 | A0A0W8DVP2 | A0A0W8DV10 | Bacterial MDR protein. | Transcription elongation factor SPT4. | 0.994 |
AM587_10004465 | AM587_10010543 | A0A0W8DVP2 | A0A0W8DDL4 | Bacterial MDR protein. | DNA-directed RNA polymerase II subunit RPB4. | 0.999 |
AM587_10004465 | AM587_10011138 | A0A0W8DVP2 | A0A0W8CC10 | Bacterial MDR protein. | DNA-directed RNA polymerases I. | 0.999 |
AM587_10004465 | AM587_10011895 | A0A0W8DVP2 | A0A0W8BWY3 | Bacterial MDR protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
AM587_10004465 | AM587_10012170 | A0A0W8DVP2 | A0A0W8DY67 | Bacterial MDR protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.969 |
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