STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10008029Uncharacterized protein. (303 aa)    
Predicted Functional Partners:
AM587_10008097
WW domain-containing protein.
    
 0.604
AM587_10016239
Lap4 protein.
    
 0.595
AM587_10005988
Ankyrin repeat and protein kinase domain-containing protein 1.
    
  0.520
AM587_10017128
26S proteasome non-ATPase regulatory subunit 10.
    
  0.520
AM587_10008332
Histone H2A deubiquitinase MYSM1.
    
 0.513
AM587_10014306
ANK_REP_REGION domain-containing protein.
    
  0.503
AM587_10004574
E3 ubiquitin-protein ligase SlrP.
    
 0.486
AM587_10005206
E3 ubiquitin-protein ligase mind-bomb.
    
  0.464
AM587_10017585
Serine/threonine-protein kinase.
    
  0.456
AM587_10011108
Serine/threonine-protein phosphatase.
    
 
 0.455
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.