STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10012176Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
AM587_10016155
Estradiol 17-beta-dehydrogenase 12-B; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.648
AM587_10014579
Epimerase domain-containing protein.
     
 0.612
AM587_10016985
Spore coat polysaccharide biosynthesis protein SpsK.
     
 0.612
AM587_10004394
L-amino-acid oxidase.
     
 0.488
AM587_10003410
Uncharacterized protein.
     
 0.488
AM587_10015560
Neutral zinc metallopeptidase.
     
 0.488
AM587_10004395
L-amino-acid oxidase.
     
 0.488
AM587_10004771
DNA endonuclease RBBP8.
     
 0.488
AM587_10017769
Sodium-dependent phosphate transport protein 2A.
     
 0.466
AM587_10005129
Carbonyl reductase family member 4.
     
 0.466
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.