STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10015455Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1377 aa)    
Predicted Functional Partners:
AM587_10007052
ALA-interacting subunit 3; Belongs to the CDC50/LEM3 family.
    
 0.534
AM587_10011593
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
    
 0.505
AM587_10013050
Dynein assembly factor 3.
    
  0.450
AM587_10004039
Homocysteine S-methyltransferase YbgG.
   
  0.413
AM587_10017108
Copper-transporting ATPase HMA5.
    
 0.406
AM587_10010776
Copper-transporting ATPase HMA5.
    
 0.406
AM587_10005717
Uncharacterized protein.
    
 0.406
AM587_10004689
Uncharacterized protein.
    
 0.406
AM587_10002633
Copper-transporting ATPase 2.
    
 0.406
AM587_10011659
Copper-transporting ATPase HMA5.
    
 0.406
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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