STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX93897.1Allantoin permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)    
Predicted Functional Partners:
allB
Cyclic amidohydrolase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
 
  
 0.939
ALX93899.1
Uracil/xanthine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.819
ALX93901.1
(S)-ureidoglycine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
ALX93903.1
Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.759
ALX93902.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.691
ALX93240.1
Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.636
ALX93904.1
Catalyzes the formation of oxalurate from ureidoglycolate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.632
ALX94588.1
Phenylhydantoinase; Catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.595
ALX93894.1
Glyoxylate carboligase; Catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
 
    0.576
hyi
Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.
 
  
 0.576
Your Current Organism:
Serratia fonticola
NCBI taxonomy Id: 47917
Other names: ATCC 29844, CCUG 14186, CCUG 37824, CCUG 57457 [[Serratia glossinae]], CIP 78.64, DSM 22080 [[Serratia glossinae]], DSM 4576, LMG 7882, LMG:7882, NBRC 102597, NCTC 12965, S. fonticola, Serratia glossinae, Serratia glossinae Geiger et al. 2010, strain 11, strain C1 [[Serratia glossinae]]
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