Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Namu_0367 | Namu_0368 | Namu_0367 | Namu_0368 | PFAM: Helix-turn-helix type 11 domain protein; KEGG: scl:sce5223 DeoR family transcriptional regulator. | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | 0.450 |
Namu_0368 | Namu_0367 | Namu_0368 | Namu_0367 | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | PFAM: Helix-turn-helix type 11 domain protein; KEGG: scl:sce5223 DeoR family transcriptional regulator. | 0.450 |
Namu_0368 | Namu_3443 | Namu_0368 | Namu_3443 | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | PFAM: diacylglycerol kinase catalytic region; KEGG: eba:ebA590 related to diacylglycerol kinase. | 0.603 |
Namu_0368 | prs | Namu_0368 | Namu_4527 | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.468 |
Namu_0368 | rplF | Namu_0368 | Namu_1138 | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.438 |
Namu_0368 | rpoZ | Namu_0368 | Namu_4161 | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.441 |
Namu_3443 | Namu_0368 | Namu_3443 | Namu_0368 | PFAM: diacylglycerol kinase catalytic region; KEGG: eba:ebA590 related to diacylglycerol kinase. | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | 0.603 |
prs | Namu_0368 | Namu_4527 | Namu_0368 | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | 0.468 |
rplF | Namu_0368 | Namu_1138 | Namu_0368 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | 0.438 |
rplF | rpoZ | Namu_1138 | Namu_4161 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.932 |
rpoZ | Namu_0368 | Namu_4161 | Namu_0368 | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ank:AnaeK_4117 phosphoesterase PA-phosphatase related. | 0.441 |
rpoZ | rplF | Namu_4161 | Namu_1138 | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.932 |