STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_0604PFAM: oxidoreductase molybdopterin binding; KEGG: mno:Mnod_5182 oxidoreductase molybdopterin binding. (201 aa)    
Predicted Functional Partners:
Namu_0605
PFAM: Oxidoreductase FAD-binding domain protein; KEGG: afw:Anae109_1054 oxidoreductase FAD/NAD(P)- binding subunit.
 
     0.873
Namu_3249
PFAM: cytochrome c class I; KEGG: bgl:bglu_1g02900 cytochrome c2.
   
 
 0.596
Namu_0603
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: afw:Anae109_0031 EmrB/QacA family drug resistance transporter.
       0.565
Namu_0237
TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: sew:SeSA_A1161 hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
   
   0.404
Namu_0251
TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: AGAP000415-PA; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
   
   0.404
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.