STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_0911Hypothetical protein. (206 aa)    
Predicted Functional Partners:
Namu_3712
KEGG: scl:sce8823 hypothetical protein.
  
     0.574
Namu_4412
PFAM: protein of unknown function DUF190; KEGG: dvm:DvMF_0462 protein of unknown function DUF190.
  
     0.518
Namu_3002
Hypothetical protein.
  
     0.511
Namu_4878
PFAM: PAS fold-3 domain protein; KEGG: bph:Bphy_5692 multi-sensor signal transduction histidine kinase.
  
     0.502
Namu_5064
PFAM: Carboxymuconolactone decarboxylase; KEGG: ecm:EcSMS35_1437 carboxymuconolactone decarboxylase family protein.
 
    0.451
Namu_0912
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: afw:Anae109_1068 DNA binding domain- containing protein.
       0.435
Namu_3039
KEGG: shm:Shewmr7_0914 hypothetical protein.
  
     0.426
Namu_0099
Hypothetical protein.
  
     0.404
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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