STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_1685PFAM: DoxX family protein; KEGG: geo:Geob_0817 DoxX family protein. (166 aa)    
Predicted Functional Partners:
Namu_1686
Protein-disulfide isomerase-like protein; KEGG: bvi:Bcep1808_3669 hypothetical protein.
 
     0.670
Namu_1684
PFAM: phosphate transporter; KEGG: glo:Glov_0587 phosphate transporter.
     
 0.581
Namu_1683
Hypothetical protein.
       0.542
Namu_3124
KEGG: dvu:DVU0938 isoamylase N-terminal domain- containing protein.
 
     0.470
Namu_1430
KEGG: bur:Bcep18194_B0472 hypothetical protein.
  
    0.459
Namu_4357
PFAM: metallophosphoesterase; KEGG: mno:Mnod_5380 metallophosphoesterase.
  
   
 0.423
Namu_0696
PFAM: flavin-containing monooxygenase FMO; KEGG: xcv:XCV2088 FAD containing monooxygenase.
  
    0.401
Namu_2861
PFAM: flavin-containing monooxygenase FMO; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmw:Mmwyl1_4167 flavin-containing monooxygenase.
  
    0.401
Namu_3461
PFAM: FAD dependent oxidoreductase; KEGG: steroid monooxygenase.
  
    0.401
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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