STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_1894PFAM: globin; KEGG: protozoan/cyanobacterial globin family protein; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C). (122 aa)    
Predicted Functional Partners:
Namu_1823
PFAM: globin; KEGG: bvi:Bcep1808_6013 globin.
  
   
 0.774
Namu_1893
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase.
       0.554
Namu_1892
Hypothetical protein; KEGG: serine protease.
       0.518
Namu_1895
Hypothetical protein; KEGG: similar to EGF-like-domain, multiple 6.
       0.468
Namu_0495
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; Oxidoreductase FAD-binding domain protein; KEGG: avn:Avin_51090 flavohemoglobin Hmp; Belongs to the globin family.
  
  
 0.454
Namu_4950
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; Oxidoreductase FAD-binding domain protein; KEGG: afr:AFE_0860 iron-sulfur cluster-binding protein/oxidoreductase, FAD/NAD-binding; Belongs to the globin family.
  
  
 0.454
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.