STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_2062PFAM: CopG domain protein DNA-binding domain protein. (91 aa)    
Predicted Functional Partners:
Namu_2063
Hypothetical protein.
       0.472
Namu_2064
Transcriptional activator adenine-specific DNA methyltransferase-like protein; KEGG: dal:Dalk_4528 MT-A70 family protein; Belongs to the MT-A70-like family.
       0.469
Namu_2061
PFAM: transposase IS4 family protein; KEGG: mpo:Mpop_4643 transposase IS4 family protein.
       0.464
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.