STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_2457PFAM: Domain of unknown function DUF1918. (88 aa)    
Predicted Functional Partners:
Namu_2458
Hypothetical protein.
       0.596
Namu_4984
PFAM: peptidase S15; KEGG: tgr:Tgr7_2029 hypothetical protein.
  
     0.534
Namu_2009
Hypothetical protein; KEGG: smt:Smal_1193 major facilitator superfamily MFS_1.
  
     0.499
Namu_3292
Flavin-nucleotide-binding protein-like protein; KEGG: mlo:mlr4723 hypothetical protein.
  
     0.411
Namu_4727
KEGG: nha:Nham_3709 hypothetical protein.
  
     0.404
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.