STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_3025PFAM: toxic anion resistance family protein; KEGG: hypothetical protein. (407 aa)    
Predicted Functional Partners:
Namu_3024
KEGG: dac:Daci_0767 hypothetical protein.
 
  
 0.949
Namu_3023
PFAM: stress protein; KEGG: pin:Ping_1266 stress protein, tellurium resistance protein.
 
  
 0.804
Namu_3022
KEGG: bja:blr0521 hypothetical protein.
       0.719
Namu_3021
PFAM: stress protein; KEGG: noc:Noc_1002 stress protein.
 
  
 0.591
Namu_3019
PFAM: stress protein; KEGG: pna:Pnap_4657 stress protein.
 
  
 0.523
Namu_3020
PFAM: stress protein; KEGG: noc:Noc_1002 stress protein.
 
  
 0.516
Namu_3015
PFAM: protein of unknown function DUF475; Integral membrane protein TerC; KEGG: pcr:Pcryo_1787 hypothetical protein.
 
   
 0.505
Namu_3026
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
       0.492
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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