STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_3218Hypothetical protein. (258 aa)    
Predicted Functional Partners:
Namu_3217
PFAM: regulatory protein TetR; KEGG: scl:sce6781 TetR family transcriptional regulator.
 
     0.948
Namu_3219
PFAM: protein of unknown function DUF1486; KEGG: hypothetical protein.
 
     0.709
Namu_0322
KEGG: oca:OCAR_7467 hypothetical protein.
  
     0.619
Namu_1053
Hypothetical protein; KEGG: GK23126 gene product from transcript GK23126- RA.
  
     0.619
Namu_3220
Hypothetical protein.
       0.598
Namu_1022
KEGG: geo:Geob_3309 Cna B domain protein.
  
     0.579
Namu_1911
PFAM: transcriptional regulator domain protein; KEGG: vei:Veis_3384 regulatory protein, LuxR.
  
     0.570
Namu_1023
Hypothetical protein; KEGG: gur:Gura_0739 Cna B domain-containing protein.
  
     0.554
Namu_1895
Hypothetical protein; KEGG: similar to EGF-like-domain, multiple 6.
  
     0.547
Namu_1061
Hypothetical protein.
  
     0.546
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.