STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_3325PFAM: carbohydrate kinase FGGY; KEGG: yen:YE2603 putative sugar kinase; Belongs to the FGGY kinase family. (519 aa)    
Predicted Functional Partners:
Namu_3324
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bcm:Bcenmc03_4497 alcohol dehydrogenase.
 
  
 0.649
Namu_3973
PFAM: carbohydrate kinase FGGY; KEGG: ecf:ECH74115_4826 carbohydrate kinase, FGGY family.
  
     0.633
Namu_0309
TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoryl transfer system HPr; KEGG: cvi:CV_0980 phosphoenolpyruvate-protein phosphotransferase.
   
 
 0.463
Namu_3322
PFAM: 3-dehydroquinate synthase; KEGG: ret:RHE_PA00022 putative glycerol 1-phosphate dehydrogenase protein (L-arabinose utilization protein) protein.
 
   
 0.455
Namu_4787
TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: bpy:Bphyt_7014 gluconate transporter.
  
  
 0.414
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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