STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_3562TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: bma:BMAA1430 iron-sulfur cluster binding protein. (501 aa)    
Predicted Functional Partners:
Namu_3563
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: sfu:Sfum_0079 protein of unknown function DUF224, cysteine-rich region domain protein.
 
 0.982
Namu_3561
PFAM: protein of unknown function DUF162; KEGG: bam:Bamb_2804 hypothetical protein.
 
 0.976
Namu_1034
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: dat:HRM2_14000 cysteine-rich domain family protein (CCG family protein).
 
 0.973
Namu_3730
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: sfu:Sfum_0079 protein of unknown function DUF224, cysteine-rich region domain protein.
 
 0.960
Namu_5226
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: dat:HRM2_14000 cysteine-rich domain family protein (CCG family protein).
 
 0.950
Namu_3732
PFAM: protein of unknown function DUF162; KEGG: bam:Bamb_2804 hypothetical protein.
 
 0.901
Namu_1032
PFAM: protein of unknown function DUF162; KEGG: rme:Rmet_5898 protein of unknown function DUF162.
 
 0.900
Namu_5228
PFAM: protein of unknown function DUF162; KEGG: rme:Rmet_5898 protein of unknown function DUF162.
 
 0.900
Namu_3564
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
  
 0.644
Namu_2011
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ade:Adeh_0810 hypothetical protein.
  
 
 0.542
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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