node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Namu_1192 | miaA | Namu_1192 | Namu_3983 | PFAM: protein of unknown function UPF0079; KEGG: geo:Geob_2940 protein of unknown function UPF0079. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.616 |
Namu_1192 | pheT | Namu_1192 | Namu_4136 | PFAM: protein of unknown function UPF0079; KEGG: geo:Geob_2940 protein of unknown function UPF0079. | KEGG: ade:Adeh_1971 phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit. | 0.559 |
Namu_3296 | miaA | Namu_3296 | Namu_3983 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.611 |
Namu_3984 | Namu_3985 | Namu_3984 | Namu_3985 | KEGG: scl:sce1740 hypothetical protein. | PFAM: protein of unknown function DUF349; KEGG: Hypothetical protein CBG02561. | 0.616 |
Namu_3984 | dapF | Namu_3984 | Namu_3982 | KEGG: scl:sce1740 hypothetical protein. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.832 |
Namu_3984 | hflX | Namu_3984 | Namu_3981 | KEGG: scl:sce1740 hypothetical protein. | GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.656 |
Namu_3984 | miaA | Namu_3984 | Namu_3983 | KEGG: scl:sce1740 hypothetical protein. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.832 |
Namu_3985 | Namu_3984 | Namu_3985 | Namu_3984 | PFAM: protein of unknown function DUF349; KEGG: Hypothetical protein CBG02561. | KEGG: scl:sce1740 hypothetical protein. | 0.616 |
Namu_3985 | dapF | Namu_3985 | Namu_3982 | PFAM: protein of unknown function DUF349; KEGG: Hypothetical protein CBG02561. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.616 |
Namu_3985 | hflX | Namu_3985 | Namu_3981 | PFAM: protein of unknown function DUF349; KEGG: Hypothetical protein CBG02561. | GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.522 |
Namu_3985 | miaA | Namu_3985 | Namu_3983 | PFAM: protein of unknown function DUF349; KEGG: Hypothetical protein CBG02561. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.641 |
Namu_4300 | miaA | Namu_4300 | Namu_3983 | PFAM: conserved hypothetical protein; KEGG: sat:SYN_01766 lysine decarboxylase family protein; Belongs to the LOG family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.753 |
Namu_4300 | miaB | Namu_4300 | Namu_3986 | PFAM: conserved hypothetical protein; KEGG: sat:SYN_01766 lysine decarboxylase family protein; Belongs to the LOG family. | RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.720 |
dapF | Namu_3984 | Namu_3982 | Namu_3984 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | KEGG: scl:sce1740 hypothetical protein. | 0.832 |
dapF | Namu_3985 | Namu_3982 | Namu_3985 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | PFAM: protein of unknown function DUF349; KEGG: Hypothetical protein CBG02561. | 0.616 |
dapF | hflX | Namu_3982 | Namu_3981 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.906 |
dapF | miaA | Namu_3982 | Namu_3983 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.832 |
dapF | miaB | Namu_3982 | Namu_3986 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.711 |
hflX | Namu_3984 | Namu_3981 | Namu_3984 | GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | KEGG: scl:sce1740 hypothetical protein. | 0.656 |
hflX | Namu_3985 | Namu_3981 | Namu_3985 | GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | PFAM: protein of unknown function DUF349; KEGG: Hypothetical protein CBG02561. | 0.522 |