STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_4717KEGG: rsq:Rsph17025_3969 hypothetical protein. (187 aa)    
Predicted Functional Partners:
Namu_0198
KEGG: bmj:BMULJ_03626 hypothetical protein.
  
     0.770
Namu_0971
Hypothetical protein.
  
     0.769
Namu_4771
Hypothetical protein.
  
     0.769
Namu_5138
Hypothetical protein.
  
     0.766
Namu_1497
Hypothetical protein.
  
     0.761
Namu_2166
Hypothetical protein; KEGG: similar to egg bindin receptor 1 precursor.
  
     0.754
Namu_4386
Hypothetical protein.
  
     0.754
Namu_4001
Hypothetical protein; KEGG: GH10507 gene product from transcript GH10507- RA.
  
     0.747
Namu_1321
KEGG: hypothetical protein.
  
     0.746
Namu_2140
PFAM: aminoglycoside phosphotransferase.
  
     0.746
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.