STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_5356PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bbr:BB0391 2Fe-2S ferredoxin. (162 aa)    
Predicted Functional Partners:
Namu_5357
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: rpb:RPB_3104 molybdopterin dehydrogenase, FAD- binding.
 
 
 0.998
Namu_5355
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bpe:BP0685 dehydrogenase/oxidase.
 
 0.997
Namu_4147
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bph:Bphy_0094 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.993
Namu_5287
TIGRFAM: carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: aeh:Mlg_1564 carbon monoxide dehydrogenase, large subunit apoprotein.
 
 0.991
Namu_4146
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mno:Mnod_2020 molybdopterin dehydrogenase FAD- binding.
 
 0.987
Namu_0258
KEGG: mxa:MXAN_3143 putative xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.
 
     0.961
Namu_5284
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: aeh:Mlg_1562 carbon monoxide dehydrogenase, medium subunit.
 
 0.934
Namu_1390
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: azc:AZC_4623 putative dehydrogenase.
 
 
0.829
Namu_5354
PFAM: carbon monoxide dehydrogenase subunit G; cyclase/dehydrase; KEGG: mno:Mnod_3296 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
     0.827
Namu_4750
PFAM: protein of unknown function DUF182; KEGG: msl:Msil_0236 protein of unknown function DUF182.
 
  
 0.791
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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