STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0015Hypothetical protein; KEGG: rpi:Rpic_3544 heavy metal transport/detoxification protein. (93 aa)    
Predicted Functional Partners:
Sros_7702
Hypothetical protein; KEGG: ajs:Ajs_2057 superoxide dismutase, copper/zinc binding.
   
 0.929
Sros_7975
Cu/Zn superoxide dismutase-like protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.929
Sros_0020
KEGG: bar:GBAA3859 heavy metal-transporting ATPase.
 
 
 0.869
Sros_3699
KEGG: bar:GBAA3859 heavy metal-transporting ATPase.
 
 
 0.823
Sros_4803
KEGG: mno:Mnod_6169 heavy metal translocating P- type ATPase.
  
 
 0.617
Sros_1433
KEGG: hch:HCH_00429 cation transport ATPase.
  
 
 0.604
Sros_0019
KEGG: sus:Acid_3773 hypothetical protein.
 
   
 0.547
Sros_0017
KEGG: ade:Adeh_3495 hypothetical protein.
  
  
 0.537
Sros_0016
KEGG: bur:Bcep18194_A3935 EmrB/QacA family drug resistance transporter.
       0.471
Sros_0024
KEGG: sus:Acid_1031 CopY family transcriptional regulator.
  
  
 0.432
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.