STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0020KEGG: bar:GBAA3859 heavy metal-transporting ATPase. (746 aa)    
Predicted Functional Partners:
Sros_0018
KEGG: bmn:BMA10247_A2118 copper-translocating P- type ATPase.
 
 
 0.926
Sros_0019
KEGG: sus:Acid_3773 hypothetical protein.
  
 0.871
Sros_0015
Hypothetical protein; KEGG: rpi:Rpic_3544 heavy metal transport/detoxification protein.
 
 
 0.869
Sros_3704
Hypothetical protein; KEGG: rpi:Rpic_3544 heavy metal transport/detoxification protein.
 
 
 0.811
Sros_3701
KEGG: bmn:BMA10247_A2118 copper-translocating P- type ATPase.
 
 
 0.796
Sros_0017
KEGG: ade:Adeh_3495 hypothetical protein.
 
  
 0.785
Sros_9003
KEGG: bsu:BSU33510 hypothetical protein.
 
 
 0.782
Sros_3700
KEGG: sus:Acid_3773 hypothetical protein.
  
 0.595
Sros_3702
KEGG: ade:Adeh_3495 hypothetical protein.
 
  
 0.485
Sros_9134
KEGG: ade:Adeh_3495 hypothetical protein.
 
  
 0.480
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.