STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0038KEGG: swp:swp_3997 hypothetical protein. (186 aa)    
Predicted Functional Partners:
Sros_1109
Hypothetical protein.
  
     0.670
Sros_2656
KEGG: afr:AFE_2017 PspA/IM30 family.
 
  
 0.622
Sros_0041
KEGG: sus:Acid_5722 hypothetical protein.
  
  
 0.612
Sros_6748
KEGG: hypothetical protein.
  
    0.564
Sros_0040
KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit.
  
    0.547
Sros_2657
Hypothetical protein.
  
     0.541
Sros_0039
KEGG: ank:AnaeK_4023 ABC-2 type transporter.
       0.537
Sros_1297
Hypothetical protein; KEGG: Glycine-rich cell wall structural protein 1 precursor, putative.
  
     0.534
Sros_7262
Zn-dependent protease with chaperone function- like protein; KEGG: hypothetical protein.
  
     0.518
Sros_5971
Transcriptional regulator.
  
     0.517
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.