STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0069KEGG: bsu:BSU23750 hypothetical protein. (136 aa)    
Predicted Functional Partners:
Sros_6815
Fructose-2 6-bisphosphatase-like protein; KEGG: afr:AFE_0621 phosphoglycerate mutase family protein.
 
   0.912
Sros_5523
ADP-ribose pyrophosphatase-like protein; KEGG: tmz:Tmz1t_1257 NUDIX hydrolase.
 
      0.773
Sros_0070
Hypothetical protein.
       0.590
Sros_0071
KEGG: hypothetical protein.
  
    0.527
Sros_6807
Hypothetical protein.
 
   
 0.475
Sros_0068
KEGG: bja:bsr4717 hypothetical protein.
       0.470
Sros_2467
KEGG: bvi:Bcep1808_5016 GCN5-related N- acetyltransferase.
 
    0.463
Sros_6384
KEGG: bur:Bcep18194_B0744 TetR family transcriptional regulator.
 
      0.433
nuoI
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)-like protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.425
nuoI-2
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)-like protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.425
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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