STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0357Uncharacterized distant relative of homeotic protein bithoraxoid-like protein; KEGG: pna:Pnap_2813 roadblock/LC7 family protein. (129 aa)    
Predicted Functional Partners:
Sros_0358
Hypothetical protein.
 
   
 0.950
Sros_0359
KEGG: dac:Daci_0776 protein of unknown function ATP binding.
 
 
 0.900
Sros_1791
KEGG: nmn:NMCC_1665 hypothetical protein.
 
 
 0.900
Sros_1811
KEGG: nmn:NMCC_1665 hypothetical protein.
 
 
 0.900
Sros_1824
KEGG: nmn:NMCC_1665 hypothetical protein.
 
 
 0.900
Sros_3123
KEGG: dac:Daci_0776 protein of unknown function ATP binding.
 
 
 0.900
Sros_3196
KEGG: dac:Daci_0776 protein of unknown function ATP binding.
 
 
 0.900
Sros_0356
Hypothetical protein; KEGG: lch:Lcho_0275 histidine kinase.
     0.890
Sros_1788
Hypothetical protein; KEGG: dvm:DvMF_1114 methyl-accepting chemotaxis sensory transducer.
   
 0.793
Sros_0360
Hypothetical protein.
 
   
 0.792
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.