STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0367KEGG: bsu:BSU31010 hypothetical protein. (499 aa)    
Predicted Functional Partners:
Sros_8849
KEGG: sfu:Sfum_2309 protein of unknown function DUF107.
  
  
 0.784
Sros_0366
Hypothetical protein.
       0.739
Sros_2656
KEGG: afr:AFE_2017 PspA/IM30 family.
 
  
 0.564
Sros_1587
KEGG: hch:HCH_00989 hypothetical protein.
  
  
 0.512
Sros_1511
Phage shock protein A (IM30) suppresses sigma54- dependent transcription-like protein; KEGG: hypothetical protein.
  
  
 0.508
Sros_7756
Hypothetical protein.
    
 0.506
Sros_4118
Membrane protease subunits stomatin/prohibitin; KEGG: gbm:Gbem_2520 band 7 protein.
     
 0.501
Sros_8850
KEGG: mxa:MXAN_3984 SPFH/band 7 domain protein.
     
 0.501
Sros_1224
KEGG: sal:Sala_2348 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.484
Sros_5057
KEGG: swi:Swit_1817 erythromycin esterase.
  
    0.476
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.