STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0400KEGG: mxa:MXAN_6734 response regulator/sensory box histidine kinase. (210 aa)    
Predicted Functional Partners:
Sros_6083
KEGG: dvm:DvMF_2541 multi-sensor signal transduction histidine kinase.
 
 
 0.977
Sros_8060
Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein; KEGG: ppd:Ppro_2997 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
  
 0.968
Sros_0401
KEGG: pzu:PHZ_c2079 sensor histidine kinase/response regulator.
 
0.960
Sros_0960
KEGG: geo:Geob_3554 PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.960
Sros_2265
KEGG: sus:Acid_0531 histidine kinase.
 
 0.957
Sros_7544
Signal transduction histidine kinase-like protein; KEGG: bra:BRADO5752 sensor histidine kinase.
 
 0.955
Sros_8878
KEGG: gme:Gmet_3382 heavy metal sensor signal transduction histidine kinase.
 
 0.950
Sros_8461
Bacteriophytochrome (light-regulated signal transduction histidine kinase)-like protein; KEGG: dal:Dalk_3400 histidine kinase.
     0.946
Sros_5844
Bacteriophytochrome (light-regulated signal transduction histidine kinase)-like protein; KEGG: dal:Dalk_3400 histidine kinase.
     0.940
Sros_7359
KEGG: maq:Maqu_0096 diguanylate cyclase with PAS/PAC sensor.
 
  
 0.939
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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