STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0463KEGG: afw:Anae109_0972 chromosome partitioning-like ATPase. (360 aa)    
Predicted Functional Partners:
Sros_0462
KEGG: mxa:MXAN_5818 anion-transporting ATPase.
 
 
 
0.995
Sros_2698
Hypothetical protein; KEGG: acp:A2cp1_2307 cyclase/dehydrase.
 
     0.754
Sros_0957
Hypothetical protein.
  
     0.750
Sros_0949
Putative transcriptional regulator, XRE family; KEGG: bha:BH2909 hypothetical protein.
  
     0.725
Sros_0540
KEGG: dal:Dalk_1813 phospholipid/glycerol acyltransferase.
  
     0.714
Sros_0539
KEGG: dal:Dalk_1814 NAD-dependent epimerase/dehydratase.
  
     0.706
Sros_0466
KEGG: rpa:RPA3189 NUDIX hydrolase.
 
   
 0.694
Sros_8354
KEGG: scl:sce7427 ABC1 family protein.
  
     0.692
Sros_0903
Hypothetical protein.
  
     0.690
Sros_0464
Hypothetical protein.
       0.647
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.