STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0483Putative transcriptional regulator, MerR family; KEGG: hpa:HPAG1_0422 putative heat shock protein. (108 aa)    
Predicted Functional Partners:
Sros_0509
Hypothetical protein; KEGG: ade:Adeh_0326 methyl-accepting chemotaxis sensory transducer.
  
     0.471
Sros_2795
KEGG: nwi:Nwi_1957 XRE family transcriptional regulator.
  
    0.433
Sros_7992
Hypothetical protein.
  
     0.433
Sros_3111
KEGG: gbm:Gbem_2014 putative secreted protein.
  
     0.425
Sros_7149
Hypothetical protein.
  
     0.425
Sros_5017
Hypothetical protein; KEGG: afw:Anae109_4021 dual specificity protein phosphatase.
  
    0.424
Sros_8261
KEGG: rru:Rru_A3273 hypothetical protein.
  
     0.408
Sros_7488
Hypothetical protein.
  
    0.400
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.