STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0507Histidine kinase; KEGG: scl:sce2236 putative two-component system sensor kinase. (373 aa)    
Predicted Functional Partners:
Sros_0508
Response regulator receiver protein; KEGG: baa:BA_0519 REC, CheY-homologous receiver domain.
 
 0.937
Sros_4837
KEGG: sat:SYN_00043 gluconate kinase.
  
    0.784
Sros_0401
KEGG: pzu:PHZ_c2079 sensor histidine kinase/response regulator.
  
 
 0.778
Sros_1943
KEGG: afw:Anae109_0540 GAF sensor hybrid histidine kinase.
  
 
 0.778
Sros_1936
Response regulator receiver protein; KEGG: bsu:BSU33080 hypothetical protein.
 
 0.742
Sros_0506
S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
 
    0.694
Sros_0503
Response regulator receiver protein; KEGG: gur:Gura_0759 two component LuxR family transcriptional regulator.
 
 
 0.687
Sros_0928
KEGG: xac:XAC2168 two-component system regulatory protein.
 
 0.677
Sros_0200
KEGG: mmr:Mmar10_2544 putative signal transduction histidine kinase.
  
     0.662
Sros_0074
KEGG: aca:ACP_2113 two-component response regulator.
 
 0.658
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.