STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0569KEGG: pol:Bpro_4368 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (324 aa)    
Predicted Functional Partners:
Sros_3416
KEGG: bam:Bamb_5949 DNA-binding transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
  
     0.773
Sros_8423
Transcriptional regulator-like protein; KEGG: ses:SARI_01491 hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.770
Sros_3617
KEGG: mes:Meso_0578 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.769
Sros_0861
KEGG: bid:Bind_2980 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.753
Sros_7048
KEGG: mxa:MXAN_5480 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.749
Sros_0846
KEGG: bpe:BP2857 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.743
Sros_0568
KEGG: bxe:Bxe_A0745 DMT superfamily drug/metabolite efflux pump.
  
    0.562
Sros_0570
KEGG: bar:GBAA3033 alkaline D-peptidase.
       0.436
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.