STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0651KEGG: bch:Bcen2424_6650 dTDP-4-dehydrorhamnose 3,5- epimerase. (187 aa)    
Predicted Functional Partners:
Sros_0633
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.999
Sros_9208
dTDP-4-dehydrorhamnose reductase-like protein; KEGG: mxa:MXAN_4612 putative dTDP-4-dehydrorhamnose reductase.
 
 
 0.996
Sros_0632
KEGG: dvm:DvMF_0141 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.995
Sros_6490
KEGG: afw:Anae109_4443 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.995
Sros_0631
dTDP-glucose pyrophosphorylase-like protein; KEGG: dol:Dole_1011 glucose-1-phosphate thymidylyltransferase.
 
  
 0.955
Sros_6491
dTDP-glucose pyrophosphorylase-like protein; KEGG: dvl:Dvul_2059 glucose-1-phosphate thymidylyltransferase.
 
  
 0.944
Sros_2462
KEGG: afw:Anae109_1900 NAD-dependent epimerase/dehydratase.
  
 
 0.935
Sros_6495
KEGG: pen:PSEEN0254 TDP-4-oxo-6-deoxy-D-glucose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.928
Sros_0634
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 
0.917
Sros_4001
KEGG: gme:Gmet_3178 phosphoglucomutase/phosphomannomutase family protein.
  
 
 0.874
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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