STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0654KEGG: mno:Mnod_5881 glycosyl transferase group 1. (392 aa)    
Predicted Functional Partners:
Sros_0655
GDP-mannose 6-dehydrogenase; KEGG: mno:Mnod_5882 nucleotide sugar dehydrogenase.
  
 0.966
Sros_0653
KEGG: mlo:mlr1181 hypothetical protein.
       0.689
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.571
Sros_1603
KEGG: aca:ACP_2720 4-alpha-D-((1->4)-alpha-D- glucano)trehalose trehalohydrolase.
   
 0.560
Sros_0630
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: acp:A2cp1_1500 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.555
Sros_7533
Hypothetical protein; KEGG: dvl:Dvul_2047 isoamylase N-terminal domain- containing protein.
   
 0.523
Sros_0374
KEGG: mxa:MXAN_1101 UDP-N-acetylglucosamine 2- epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.498
Sros_0639
KEGG: met:M446_4986 hypothetical protein.
 
     0.494
Sros_0656
KEGG: cak:Caul_4871 hypothetical protein.
       0.494
Sros_0641
KEGG: rce:RC1_3989 polysaccharide biosynthesis protein, putative.
 
  
 0.481
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.