STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0735ATPase-like protein; KEGG: sus:Acid_5780 serine/threonine protein kinase. (1118 aa)    
Predicted Functional Partners:
Sros_0736
Hypothetical protein; KEGG: dar:Daro_0364 ABC transporter.
 
     0.758
Sros_0734
Hypothetical protein.
       0.559
Sros_5337
KEGG: bra:BRADO5007 TetR family transcriptional regulator.
  
     0.521
Sros_7884
Hypothetical protein; KEGG: dar:Daro_0364 ABC transporter.
 
     0.516
Sros_0319
TIR protein; KEGG: mno:Mnod_8809 TIR protein.
  
     0.439
Sros_9303
Amidohydrolase 2; KEGG: cak:Caul_1976 amidohydrolase 2.
  
     0.430
Sros_9287
Hypothetical protein.
  
     0.427
Sros_5899
KEGG: pol:Bpro_1435 hypothetical protein.
  
   
 0.423
Sros_3965
KEGG: mmr:Mmar10_0510 hypothetical protein.
  
     0.419
Sros_7231
KEGG: met:M446_3776 hypothetical protein.
  
     0.407
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.